STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ04057.1KEGG: gfo:GFO_1901 hypothetical protein; SPTR: Putative uncharacterized protein. (225 aa)    
Predicted Functional Partners:
EHQ03364.1
TIGRFAM: gliding motility associated protein GldN; InterPro IPR019847; KEGG: gfo:GFO_3012 gliding motility protein GldO; SPTR: Gliding motility protein GldO; TIGRFAM: Gliding motility associated protein GldN.
  
     0.774
EHQ04444.1
PFAM: Plasmid pRiA4b ORF-3-like protein; KEGG: zpr:ZPR_3106 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
EHQ02450.1
PFAM: Protein of unknown function (DUF3098); KEGG: zpr:ZPR_4440 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
EHQ03363.1
PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; InterPro IPR019859; KEGG: cat:CA2559_00735 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein GldM.
  
     0.756
EHQ01259.1
Protein of unknown function methylase putative; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR016065; KEGG: gfo:GFO_1827 hypothetical protein; PFAM: Protein of unknown function methylase putative; SPTR: Putative uncharacterized protein.
  
     0.731
EHQ03434.1
KEGG: gfo:GFO_2691 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.724
EHQ04113.1
KEGG: cat:CA2559_12833 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.709
EHQ03430.1
Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556; KEGG: gfo:GFO_2695 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.700
EHQ03750.1
PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain; COGs: COG1705 Muramidase (flagellum-specific); InterPro IPR013338:IPR002482:IPR002901:IPR018392; KEGG: gfo:GFO_0239 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase family protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme subfamily 2; Peptidoglycan-binding Lysin subgroup; SPTR: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase family protein.
  
     0.686
EHQ02253.1
KEGG: gfo:GFO_2859 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
Your Current Organism:
Gillisia limnaea
NCBI taxonomy Id: 865937
Other names: G. limnaea DSM 15749, Gillisia limnaea DSM 15749, Gillisia limnaea R-8282, Gillisia limnaea str. DSM 15749, Gillisia limnaea strain DSM 15749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.