STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX67648.1KEGG: spu:593800 hypothetical LOC593800; SPTR: Putative uncharacterized protein. (163 aa)    
Predicted Functional Partners:
ADX67647.1
Membrane-flanked domain DUF304; InterPro IPR005182; KEGG: bvu:BVU_2479 hypothetical protein; PFAM: Domain of unknown function DUF304l; SPTR: Membrane-flanked domain-containing protein; PFAM: Bacterial membrane flanked domain.
       0.511
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.