STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADX68636.1KEGG: pgi:PG0862 type IIS restriction endonuclease, putative; SPTR: Putative type IIS restriction endonuclease; PFAM: Eco57I restriction endonuclease. (1135 aa)    
Predicted Functional Partners:
ADX68641.1
Helicase domain protein; InterPro IPR006935:IPR001650:IPR014001; KEGG: deb:DehaBAV1_0183 helicase domain-containing protein; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: Putative uncharacterized protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
     0.796
ADX68638.1
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119; KEGG: coc:Coch_1950 multiple promoter invertase; PFAM: Resolvase, N-terminal; SMART: Resolvase, N-terminal; SPTR: Resolvase family site-specific recombinase; PFAM: Resolvase, N terminal domain.
  
     0.598
ADX66844.1
Hypothetical protein; KEGG: dbr:Deba_3280 phage uncharacterized protein; SPTR: Putative uncharacterized protein.
  
     0.514
ADX66989.1
InterPro IPR002941; KEGG: bpo:BP951000_1480 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA (Cytosine-5-)-methyltransferase; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.443
Your Current Organism:
Weeksella virosa
NCBI taxonomy Id: 865938
Other names: W. virosa DSM 16922, Weeksella virosa ATCC 43766, Weeksella virosa CIP 103040, Weeksella virosa DSM 16922, Weeksella virosa str. DSM 16922, Weeksella virosa strain DSM 16922
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