STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU097_003475Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
TUBB3
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.709
CU097_014836
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.613
UBI::CRP6
Ubiquitin-40S ribosomal protein S27a.
    
  0.562
UBC9
E2 SUMO-conjugating protein ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.535
MYSM1_1
Myb-like, SWIRM and MPN domains 1.
    
  0.519
MYSM1_2
Myb-like, SWIRM and MPN domains 1.
    
  0.519
PMT3
Dolichyl-phosphate-mannose-protein mannosyltransferase pmt3.
    
 0.506
CU097_012792
Uncharacterized protein.
    
  0.502
SEC23
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
  0.498
CU097_013957
Uncharacterized protein.
    
  0.472
Your Current Organism:
Rhizopus azygosporus
NCBI taxonomy Id: 86630
Other names: ATCC 48108, CBS 357.93, R. azygosporus, Rhizopus microsporus var. azygosporus
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