STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ25243.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (292 aa)    
Predicted Functional Partners:
SDJ25224.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.980
SDJ42712.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 0.968
SDJ25265.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.964
SDJ35344.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.932
SDJ26224.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.908
SDJ46566.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.906
SDJ26932.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.897
SDJ35793.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.894
SDJ37372.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.891
SDJ25804.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.889
Your Current Organism:
Salimicrobium halophilum
NCBI taxonomy Id: 86666
Other names: ATCC 49085, Bacillus halophilus, CCM 4074, DSM 4771, HAMBI 2106, JCM 12305, LMG 17942, LMG:17942, NBRC 102426, S. halophilum, strain N23-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.