STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP01103.1Lipoprotein NlpI. (321 aa)    
Predicted Functional Partners:
SFP06903.1
Carboxyl-terminal processing protease.
    
 
 0.826
SFO97509.1
Chorismate mutase.
 
     0.794
SFP06932.1
ProP effector.
  
   
 0.786
SFP61352.1
Lipopolysaccharide export system protein LptC.
  
   
 0.784
SFP26830.1
Disulfide bond formation protein DsbB.
  
     0.774
SFP35787.1
DNA mismatch repair protein MutH.
  
     0.772
SFP71477.1
Hypothetical protein.
  
     0.772
SFP23383.1
Hypothetical protein.
  
     0.771
SFP61228.1
Phospholipid transport system substrate-binding protein.
  
   
 0.771
SFP24260.1
Hypothetical protein.
  
     0.767
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.