STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL98372.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
AFL98374.1
PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
       0.783
AFL98370.1
Hypothetical protein.
       0.781
AFL98371.1
Phage protein D; PFAM: Phage late control gene D protein (GPD).
       0.781
AFL98373.1
Hypothetical protein.
       0.777
AFL98367.1
Hypothetical protein; Manually curated; non-canonical start codon.
       0.544
AFL98366.1
Hypothetical protein.
       0.539
AFL98365.1
Hypothetical protein.
       0.538
AFL98364.1
Hypothetical protein.
       0.536
AFL98368.1
Hypothetical protein.
       0.536
AFL98369.1
Hypothetical protein.
       0.536
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.