STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL98383.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
AFL98384.1
PFAM: Protein of unknown function (DUF935).
       0.783
AFL98382.1
TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain.
       0.781
AFL98381.1
Hypothetical protein.
       0.603
AFL98385.1
PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family.
       0.509
AFL98379.1
Hypothetical protein.
       0.410
AFL98380.1
Protease subunit of ATP-dependent protease; PFAM: Clp protease; Belongs to the peptidase S14 family.
       0.409
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.