STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB12686.1Alpha/beta hydrolase fold protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR000073; KEGG: opr:Ocepr_0147 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein; IMG reference gene:2504661570; PFAM: X-Pro dipeptidyl-peptidase (S15 family). (306 aa)    
Predicted Functional Partners:
pgi
COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: mrb:Mrub_2801 phosphoglucose isomerase (PGI); PFAM: Phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; IMG reference gene:2504661569; PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
       0.773
AEB12687.1
Iron sulfur domain-containing, CDGSH-type; InterPro IPR006622:IPR018967; KEGG: mrb:Mrub_2798 zinc finger CDGSH-type domain-containing protein; PFAM: Iron sulphur-containing domain, CDGSH-type; SPTR: Zinc finger CDGSH-type domain protein; IMG reference gene:2504661571; PFAM: Iron-binding zinc finger CDGSH type.
       0.773
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.572
AEB12684.1
Peptidase S45 penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: rxy:Rxyl_2001 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; SPTR: Peptidase S45 penicillin amidase; IMG reference gene:2504661568; PFAM: Penicillin amidase.
       0.414
Your Current Organism:
Marinithermus hydrothermalis
NCBI taxonomy Id: 869210
Other names: M. hydrothermalis DSM 14884, Marinithermus hydrothermalis DSM 14884, Marinithermus hydrothermalis T1, Marinithermus hydrothermalis str. DSM 14884, Marinithermus hydrothermalis strain DSM 14884
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.