STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM10744.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
AFM10742.1
Hypothetical protein.
       0.773
AFM10743.1
KEGG: lbf:LBF_3369 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFM10741.1
PFAM: DNA polymerase family B; COGs: COG0417 DNA polymerase elongation subunit (family B); InterPro IPR006172:IPR006134; KEGG: lbf:LBF_2104 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase, family B, conserved region; SMART: DNA-directed DNA polymerase, family B; SPTR: Putative DNA polymerase.
       0.752
AFM10740.1
TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; COGs: COG0560 Phosphoserine phosphatase; InterPro IPR006385:IPR005834; KEGG: mxa:MXAN_2679 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial.
       0.686
AFM10745.1
KEGG: lbf:LBF_2103 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.594
AFM10739.1
PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: lil:LA_0891 NADH dehydrogenase (ubiquinone) chain E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) chain E; TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit.
       0.549
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.