STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM12034.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
AFM12035.1
Hypothetical protein.
       0.773
AFM12036.1
PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: lbf:LBF_0897 two component response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative two-component response regulator.
       0.773
AFM12037.1
PFAM: START domain; InterPro IPR002913; KEGG: gpb:HDN1F_18780 hypothetical protein; PFAM: Lipid-binding START; SMART: Lipid-binding START; SPTR: Putative uncharacterized protein.
       0.773
AFM12038.1
PFAM: Protein of unknown function (DUF3108); KEGG: ran:Riean_0799 ATP-dependent exodnase (exonuclease v) alpha subunit - helicase superfamily I member; SPTR: ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member.
       0.768
AFM12039.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; Sensors of blue-light using FAD; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054:IPR007024; KEGG: ngr:NAEGRDRAFT_70440 BLUF domain-containing soluble adenylate/guanylate cyclase; PFAM: BLUF; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Beta subunit of photoactivated adenylyl cyclase.
       0.492
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.