STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM13171.1KEGG: hoh:Hoch_2450 hypothetical protein; SPTR: Putative uncharacterized protein. (389 aa)    
Predicted Functional Partners:
AFM13844.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006657; KEGG: bba:Bd1608 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: Molydopterin dinucleotide-binding region; SPTR: Molybdopterin oxidoreductase.
 
 
 0.916
AFM13172.1
PFAM: Protein of unknown function (DUF1009); COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: lic:LIC12578 hypothetical protein; PFAM: Protein of unknown function DUF1009; SPTR: Putative uncharacterized protein.
       0.773
AFM12837.1
Hypothetical protein; InterPro IPR013519; KEGG: lbf:LBF_2445 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
AFM11042.1
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: scl:sce4399 alkane 1-monooxygenase; PFAM: Fatty acid desaturase, type 1; SPTR: Alkane 1-monooxygenase.
  
     0.593
AFM13173.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
       0.588
AFM11674.1
Hypothetical protein; InterPro IPR013519; KEGG: lbf:LBF_2445 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.585
AFM14262.1
KEGG: lbl:LBL_2853 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.583
AFM12207.1
KEGG: lbf:LBF_2445 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.582
AFM12832.1
Acetyltransferase; PFAM: PGAP1-like protein; COGs: COG1075 acetyltransferase and hydrolase with the alpha/beta hydrolase fold; KEGG: lbf:LBF_0750 acetyltransferase; SPTR: Putative triacylglycerol lipase; putative signal peptide.
  
     0.577
AFM13184.1
Hypothetical protein; KEGG: gme:Gmet_2185 fibronectin, type III; SPTR: Fibronectin, type III.
 
     0.568
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.