STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM14307.1KEGG: lbl:LBL_1688 ABC-type transport system involved in gliding motility; SPTR: ABC-type transport system involved in gliding motility. (251 aa)    
Predicted Functional Partners:
AFM14308.1
PFAM: ABC-type uncharacterized transport system; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019196; KEGG: lbl:LBL_1689 ABC-type transport system involved in gliding motility; PFAM: ABC-type uncharacterised transport system; SPTR: ABC-type transport system involved in gliding motility.
  
 0.995
AFM14306.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0361 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein.
 
 
 0.972
AFM14607.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: lbf:LBF_0484 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transport system, ATPase.
 
 0.935
AFM13355.1
PFAM: ABC-type uncharacterized transport system; InterPro IPR019196; KEGG: sur:STAUR_2318 ABC-type transport system involved in multi-copper enzyme maturation, membrane protein; PFAM: ABC-type uncharacterised transport system; SPTR: ABC-type transport system involved in multi-copper enzyme maturation, membrane protein.
 
     0.775
AFM14309.1
KEGG: cth:Cthe_2709 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.768
AFM14279.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: lic:LIC13431 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC Transporter, ATP-binding protein.
 
 
 0.727
AFM14434.1
PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sde:Sde_1170 30S ribosomal protein S16; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
 0.727
AFM14310.1
Hypothetical protein; KEGG: rcu:RCOM_1155230 tetratricopeptide repeat protein, tpr, putative; SPTR: Tetratricopeptide repeat protein, tpr, putative.
       0.588
AFM14311.1
Hypothetical protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; KEGG: lbf:LBF_0506 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.588
Your Current Organism:
Turneriella parva
NCBI taxonomy Id: 869212
Other names: T. parva DSM 21527, Turneriella parva DSM 21527, Turneriella parva H, Turneriella parva NCTC 11395, Turneriella parva str. DSM 21527, Turneriella parva strain DSM 21527
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.