STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ32769.1PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT; InterPro IPR011724:IPR012994; KEGG: fbl:Fbal_2693 cyd operon protein YbgT; PFAM: Membrane bound YbgT-like; SPTR: Cyd operon protein YbgT; TIGRFAM: Cyd operon protein YbgT. (34 aa)    
Predicted Functional Partners:
EIJ32771.1
PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: avn:Avin_19890 cytochrome bd ubiquinol oxidase subunit I; PFAM: Cytochrome bd ubiquinol oxidase, subunit I; SPTR: Cytochrome bd ubiquinol oxidase, subunit I.
 
 
 0.934
EIJ32770.1
PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: alv:Alvin_2500 cytochrome d ubiquinol oxidase subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II.
 
 
 0.901
EIJ32780.1
PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: avn:Avin_19890 cytochrome bd ubiquinol oxidase subunit I; PFAM: Cytochrome bd ubiquinol oxidase, subunit I; SPTR: Cytochrome bd ubiquinol oxidase, subunit I.
 
 
 0.779
EIJ35487.1
PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: avn:Avin_19890 cytochrome bd ubiquinol oxidase subunit I; PFAM: Cytochrome bd ubiquinol oxidase, subunit I; SPTR: Cytochrome bd ubiquinol oxidase, subunit I.
 
 
 0.750
EIJ32779.1
PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: alv:Alvin_2500 cytochrome d ubiquinol oxidase subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II.
 
 
 0.657
EIJ35486.1
PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: alv:Alvin_2500 cytochrome d ubiquinol oxidase subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II.
 
 
 0.613
EIJ32772.1
KEGG: ang:ANI_1_1614024 hypothetical protein; SPTR: Predicted protein.
       0.539
EIJ36920.1
PFAM: Cytochrome oxidase subunit II; COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: bgf:BC1003_3896 cytochrome d ubiquinol oxidase subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR: Cytochrome bd ubiquinol oxidase subunit II.
  
 
 0.521
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.