STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
EIJ32997.1PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; HAMAP: Electron transport complex protein rnfD; InterPro IPR004338:IPR011303; KEGG: alv:Alvin_2676 RnfABCDGE type electron transport complex subunit D; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: Electron transport complex protein rnfD 2; TIGRFAM: Electron transport complex, RnfD. (357 aa)    
Predicted Functional Partners:
EIJ32996.1
Electron transport complex protein rnfC; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; HAMAP: Electron transport complex protein rnfC; InterPro IPR011538:IPR019554:IPR001450:IPR010208; KEGG: alv:Alvin_2675 RnfABCDGE type electron transport complex subunit C; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Electron transport complex, RnfABCDGE type, [...]
 
 
 0.992
EIJ32998.1
PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; COGs: COG4659 NADH:ubiquinone oxidoreductase subunit RnfG; InterPro IPR007329:IPR010209; KEGG: zmn:Za10_1425 electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding; SPTR: Electron transport complex, RnfABCDGE type, G subunit; TIGRFAM: Electron transport complex, RnfG.
 
 
 0.992
EIJ32999.1
PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; HAMAP: Electron transport complex protein rnfE; InterPro IPR003667:IPR010968; KEGG: alv:Alvin_2678 RnfABCDGE type electron transport complex subunit E; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex protein rnfE 2; TIGRFAM: Electron transport complex, RnfE.
 
 
 0.992
EIJ33292.1
Electron transport complex protein rnfC; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; HAMAP: Electron transport complex protein rnfC; InterPro IPR010208:IPR011538:IPR019554; KEGG: tgr:Tgr7_2628 electron transport complex protein RnfC; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; SPTR: Electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: Electron transport complex, RnfC.
 
 
 0.962
EIJ33295.1
PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; HAMAP: Electron transport complex protein rnfE; InterPro IPR010968:IPR003667; KEGG: tgr:Tgr7_2631 electron transport complex RsxE subunit; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex protein rnfE; TIGRFAM: Electron transport complex, RnfE.
 
 
 0.962
EIJ35218.1
PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; InterPro IPR003667:IPR010968; KEGG: slt:Slit_2482 electron transport complex, RnfABCDGE type, E subunit; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex, RnfABCDGE type, E subunit; TIGRFAM: Electron transport complex, RnfE.
 
 
 0.962
EIJ35221.1
Electron transport complex protein rnfC; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; HAMAP: Electron transport complex protein rnfC; InterPro IPR011538:IPR019554:IPR010208; KEGG: alv:Alvin_1173 RnfABCDGE type electron transport complex subunit C; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; SPTR: Electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: Electron transport complex, RnfC.
 
 
 0.962
EIJ33294.1
PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; COGs: COG4659 NADH:ubiquinone oxidoreductase subunit RnfG; InterPro IPR010209:IPR007329; KEGG: mca:MCA2897 electron transport complex, G subunit; PFAM: FMN-binding; SPTR: Electron transport complex, RnfABCDGE type, G subunit subfamily; TIGRFAM: Electron transport complex, RnfG.
 
 
 0.961
EIJ32852.1
PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA; HAMAP: Electron transport complex protein rnfA; InterPro IPR011293:IPR003667; KEGG: alv:Alvin_2673 RnfABCDGE type electron transport complex subunit A; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex, RnfABCDGE type, A subunit; TIGRFAM: Electron transport complex, RnfA.
 
 
 0.955
EIJ32853.1
Electron transport complex protein rnfB; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; COGs: COG2878 NADH:ubiquinone oxidoreductase subunit RnfB; HAMAP: Electron transport complex, RnfB, subgroup; InterPro IPR016463:IPR010207:IPR007202:IPR001450; KEGG: alv:Alvin_2674 RnfABCDGE type electron transport complex subunit B; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Electron transport complex protein rnfB 2; TIGRFAM: Electron transport complex, RnfB.
 
 
 0.950
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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