STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ33617.1Bacterioferritin; PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; COGs: COG2193 Bacterioferritin (cytochrome b1); InterPro IPR008331:IPR002024; KEGG: syp:SYNPCC7002_A2663 bacterioferritin; PFAM: Ferritin/Dps protein; SPTR: Bacterioferritin; TIGRFAM: Bacterioferritin. (156 aa)    
Predicted Functional Partners:
EIJ33630.1
PFAM: BFD-like [2Fe-2S] binding domain; InterPro IPR007419; KEGG: slo:Shew_0552 BFD/(2Fe-2S)-binding domain-containing protein; PFAM: BFD-like [2Fe-2S]-binding region; SPTR: Putative uncharacterized protein.
 
 
 0.871
EIJ36367.1
PFAM: BFD-like [2Fe-2S] binding domain; InterPro IPR007419; KEGG: eba:ebD41 bacterioferritin-associated ferredoxin; PFAM: BFD-like [2Fe-2S]-binding region; SPTR: Bacterioferritin-associated ferredoxin.
  
 
 0.808
EIJ35129.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006657:IPR007419; KEGG: reh:H16_B0776 nitrate reductase [NADH]; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region; SPTR: Nitrate reductase [NADH].
  
 
 0.800
EIJ33590.1
Bacterioferritin; PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; COGs: COG2193 Bacterioferritin (cytochrome b1); InterPro IPR008331:IPR002024; KEGG: avn:Avin_10050 bacterioferritin protein; PFAM: Ferritin/Dps protein; SPTR: Bacterioferritin; TIGRFAM: Bacterioferritin.
 
  
 
0.788
EIJ35774.1
PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: hna:Hneap_0045 ferrochelatase; PFAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase.
     
 0.778
EIJ33616.1
Hypothetical protein.
       0.757
EIJ33921.1
PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: etr:ETAE_2685 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist.
   
  
 0.679
EIJ33618.1
ABC-type transporter, integral membrane subunit; PFAM: ABC 3 transport family; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: meh:M301_1213 ABC-3 protein; PFAM: ABC-3; SPTR: ABC 3 transporter family protein.
       0.563
EIJ33619.1
PFAM: Periplasmic solute binding protein family; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: meh:M301_1212 periplasmic solute-binding protein; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Putative uncharacterized protein.
       0.563
EIJ33620.1
KEGG: tbd:Tbd_2537 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.563
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.