STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ34749.1KEGG: vap:Vapar_6229 hypothetical protein; SPTR: Putative uncharacterized protein. (801 aa)    
Predicted Functional Partners:
EIJ36351.1
PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR011768:IPR013185:IPR001059:IPR015365; KEGG: tgr:Tgr7_1232 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P.
  
 0.982
EIJ35222.1
PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Transketolase, C-terminal domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880:IPR019752:IPR001450:IPR011766; KEGG: alv:Alvin_1172 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate [...]
  
 
  0.952
EIJ34748.1
ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: scl:sce7794 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-5; SPTR: Hypothetical protein.
 
  
 0.949
EIJ34750.1
PFAM: VWA domain containing CoxE-like protein; InterPro IPR008912:IPR002035; KEGG: clj:CLJU_c06420 hypothetical protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein.
 
   
 0.949
EIJ35416.1
ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: cyn:Cyan7425_2429 ATPase; PFAM: ATPase associated with various cellular activities, AAA-5; SPTR: ATPase associated with various cellular activities AAA_5.
 
  
 0.785
EIJ35414.1
PFAM: VWA domain containing CoxE-like protein; InterPro IPR008912; KEGG: amr:AM1_3312 hypothetical protein; PFAM: vWA containing CoxE-like; SPTR: Putative uncharacterized protein.
 
   
 0.784
EIJ35418.1
InterPro IPR007527; KEGG: cyn:Cyan7425_2427 zinc finger SWIM domain-containing protein; SPTR: Zinc finger SWIM domain protein.
 
     0.783
EIJ35417.1
KEGG: cyn:Cyan7425_2428 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.779
EIJ34746.1
Hypothetical protein.
       0.778
EIJ34747.1
Hypothetical protein.
       0.778
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.