STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36089.1PFAM: Protein of unknown function (DUF2889); KEGG: rce:RC1_2673 hypothetical protein; SPTR: Putative uncharacterized protein. (186 aa)    
Predicted Functional Partners:
EIJ32889.1
PFAM: NUDIX domain; InterPro IPR000086; KEGG: noc:Noc_2749 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase.
  
     0.614
EIJ36850.1
Methyltransferase type 11; PFAM: Rhodanese-like domain; Tellurite resistance protein TehB; InterPro IPR013216; KEGG: tcx:Tcr_1126 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase.
  
     0.547
EIJ36099.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: axy:AXYL_02513 ABC transporter periplasmic protein; PFAM: Extracellular ligand-binding receptor; SPTR: Putative uncharacterized protein.
  
     0.494
EIJ36088.1
PFAM: FAD binding domain; Protein of unknown function (DUF3683); Domain of unknown function (DUF3400); FAD linked oxidases, C-terminal domain; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR004017; KEGG: tgr:Tgr7_2778 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; SPTR: FAD linked oxidase domain-containing protein.
       0.491
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.