STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36855.1PFAM: Rhodopirellula transposase; InterPro IPR011518; KEGG: amr:AM1_A0239 hypothetical protein; PFAM: Transposase, Rhodopirellula-type; SPTR: Putative uncharacterized protein; manually curated. (408 aa)    
Predicted Functional Partners:
EIJ36860.1
Condensation domain protein; PFAM: Phosphopantetheine attachment site; Condensation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterPro IPR001242:IPR006163; KEGG: ava:Ava_1611 amino acid adenylation protein; PFAM: Condensation domain; Phosphopantetheine-binding; SPTR: Condensation domain protein.
 
     0.525
EIJ36861.1
Amino acid adenylation domain protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR001242:IPR000873:IPR006163:IPR 001031; KEGG: npu:Npun_F2463 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Thioesterase; SPTR: Amino acid adenylation domain protein; TIGRFAM: Amino acid adenylation.
 
     0.501
EIJ36856.1
Sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); ATP sulphurylase; COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); HAMAP: Adenylyl-sulfate kinase; InterPro IPR002891:IPR002650; KEGG: sil:SPO0900 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; PFAM: Sulphate adenylyltransferase; Adenylylsulphate kinase, C-terminal; SPTR: Sulfate adenylyltransferase; TIGRFAM: Adenylylsulphate kinase, C-terminal.
       0.482
EIJ36858.1
Amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; Nitroreductase family; AMP-binding enzyme; Sulfotransferase domain; Condensation domain; Nonribosomal peptide synthase; TIGRFAM: SagB-type dehydrogenase domain; amino acid adenylation domain; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR020051:IPR000873:IPR006163:IPR 001242:IPR013624; KEGG: cce:Ccel_0979 amino acid adenylation protein; PFAM: Condensation domain; Phosphopantetheine-binding; AMP-dependent synthetase/ligase; Non-ribosomal peptide synthetase; [...]
 
     0.467
EIJ36859.1
PFAM: Thioesterase domain; COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: cyt:cce_1421 putative type II thioesterase; PFAM: Thioesterase; SPTR: Microcystin synthetase-associated thioesterase.
 
     0.454
EIJ33982.1
Hypothetical protein; PFAM: Integrase core domain; COGs: COG3415 Transposase and inactivated derivatives; KEGG: mar:MAE_58430 transposase; SPTR: Similar to tr|Q64CQ7|Q64CQ7; manually curated.
  
    0.437
EIJ36832.1
PFAM: Transposase IS66 family; InterPro IPR004291; KEGG: app:CAP2UW1_0910 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase IS66.
  
     0.434
EIJ35177.1
PFAM: Transposase IS66 family; InterPro IPR004291; KEGG: app:CAP2UW1_4668 hypothetical protein; PFAM: Transposase, IS66; SPTR: Putative uncharacterized protein.
  
     0.427
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.