STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ36882.1Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: pth:PTH_2382 ABC-type branched-chain amino acid transport systems, periplasmic component; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor. (621 aa)    
Predicted Functional Partners:
EIJ36100.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: psa:PST_3205 branched-chain amino acid ABC transporter, permease protein; PFAM: Bacterial inner-membrane translocator; SPTR: Probable transmembrane ABC transporter protein.
 
 
 0.968
EIJ36101.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: psa:PST_3204 branched-chain amino acid ABC transporter, permease protein; PFAM: Bacterial inner-membrane translocator; SPTR: Possible ABC transporter, permease protein.
 
 
 0.945
EIJ36097.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: reu:Reut_A3371 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
 
 
 0.921
EIJ35161.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851:IPR017778; KEGG: abo:ABO_2511 branched-chain amino acid ABC transporter permease; PFAM: Bacterial inner-membrane translocator; SPTR: Amino acid or sugar ABC transport system, permease protein, putative; TIGRFAM: ABC transporter, urea, permease protein, UrtC.
 
 
 0.891
EIJ36098.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439; KEGG: psa:PST_3207 branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter subunit.
 
 
 0.875
EIJ35253.1
PFAM: Response regulator receiver domain; ANTAR domain; COGs: COG3707 Response regulator with putative antiterminator output domain; InterPro IPR001789:IPR005561; KEGG: mca:MCA0588 response regulator NasT; PFAM: ANTAR; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator NasT.
  
   0.872
EIJ35160.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851:IPR017779; KEGG: hel:HELO_2272 ABC transporter permease; PFAM: Bacterial inner-membrane translocator; SPTR: ABC-type transport system permease protein; TIGRFAM: ABC transporter, urea, permease protein, UrtB.
 
 
 0.841
EIJ36883.1
PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: ote:Oter_1957 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Band 7 protein.
 
     0.808
EIJ36879.1
KEGG: cce:Ccel_3232 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.803
EIJ36880.1
PFAM: Ammonium Transporter Family; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: pin:Ping_2650 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Ammonium transporter; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S).
     
 0.802
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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