STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPODL_04208Transport protein particle subunit. (211 aa)    
Predicted Functional Partners:
HPODL_05217
Uncharacterized protein.
   
 0.999
HPODL_00994
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.999
HPODL_05208
Uncharacterized protein.
   
 0.999
HPODL_05167
Uncharacterized protein.
   
 0.999
HPODL_04748
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
HPODL_02194
Trafficking protein particle complex subunit BET3.
   
 0.999
HPODL_05076
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
HPODL_00063
Uncharacterized protein.
    
 0.999
HPODL_02053
Uncharacterized protein.
   
 0.998
HPODL_00816
Ras-related protein ORAB-1.
    
 0.973
Your Current Organism:
Ogataea parapolymorpha
NCBI taxonomy Id: 871575
Other names: Hansenula polymorpha DL-1, O. parapolymorpha DL-1, Ogataea parapolymorpha ATCC 26012, Ogataea parapolymorpha DL-1, Pichia angusta DL-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.