STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO63724.1Two-component system, sensor histidine kinase YesM. (591 aa)    
Predicted Functional Partners:
SEO52636.1
Two-component system, response regulator YesN.
 
 
 0.962
SEN88845.1
Two component transcriptional regulator, AraC family.
 
 0.957
SEO00090.1
Two-component system, response regulator YesN.
 
 0.942
SEO00318.1
Two-component system, response regulator YesN.
 
 
 0.930
SEN88658.1
Two-component system, sensor histidine kinase YesM.
  
  
 
0.893
SEO63566.1
Two-component system, response regulator YesN.
 
  
  0.858
SEO56170.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
 
 
 0.814
SEN51790.1
Two component transcriptional regulator, AraC family.
 
 
 0.793
SEO00055.1
iron(III) transport system substrate-binding protein.
 
 
   0.735
SEO63693.1
Uncharacterized membrane protein YesL.
  
    0.710
Your Current Organism:
Amphibacillus marinus
NCBI taxonomy Id: 872970
Other names: A. marinus, Amphibacillus marinus Ren et al. 2013, Amphibacillus sp. J1, CGMCC 1.10434, JCM 17099, strain J1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.