STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gadB-2Glutamate decarboxylase GadB; Belongs to the group II decarboxylase family. (461 aa)    
Predicted Functional Partners:
gltB
Ferredoxin-dependent glutamate synthase.
    
 0.950
gabT
4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.945
glsA
Glutaminase; Belongs to the glutaminase family.
  
 
 0.944
panC
Pantoate-beta-alanine ligase PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.941
AEF34095.1
Aldehyde dehydrogenase (NAD+) dependent; Belongs to the aldehyde dehydrogenase family.
   
 0.924
AEF34194.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.924
aldA_2
Aldehyde dehydrogenase NAD dependent AldA_2; Belongs to the aldehyde dehydrogenase family.
   
 0.924
aldA_2-2
Aldehyde dehydrogenase NAD dependent AldA_2; Belongs to the aldehyde dehydrogenase family.
   
 0.924
aldA
NAD-dependent aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
   
 0.924
aldA-2
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.924
Your Current Organism:
Mycolicibacter sinensis
NCBI taxonomy Id: 875328
Other names: M. sinensis, Mycobacterium sinense, Mycobacterium sinov, Mycobacterium sp. 506, Mycobacterium sp. JDM601, strain JDM601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.