STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AhpCAlkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (189 aa)    
Predicted Functional Partners:
AhpF
(Alkyl hydroperoxide reductase F52A protein); COG3634 Alkyl hydroperoxide reductase, large subunit.
 
  
 0.990
TrxB
Thioredoxin reductase, FAD/NAD(P)-binding protein; COG0492 Thioredoxin reductase.
  
 
 0.891
EAR29584.1
Putative peroxiredoxin/glutaredoxin family protein; COG0678 Peroxiredoxin.
  
 0.800
KatE
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
 
 0.736
CcmG
Thiol:disulfide interchange protein dsbE (cytochrome c biogenesis protein ccmG); COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.670
EAR28401.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.670
EAR28536.1
Putative lipoprotein/thioderoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.670
EAR28223.1
Hypothetical protein; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
 0.661
fur
Ferric uptake regulator; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
  
 0.636
EAR28784.1
Antioxidant, AhpC/Tsa family protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.600
Your Current Organism:
Pseudoalteromonas tunicata
NCBI taxonomy Id: 87626
Other names: P. tunicata D2, Pseudoalteromonas sp. D2, Pseudoalteromonas tunicata D2, Pseudoalteromonas tunicata str. D2, Pseudoalteromonas tunicata strain D2
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