STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCM1Glial cells missing transcription factor 1. (378 aa)    
Predicted Functional Partners:
GCM2
Glial cells missing transcription factor 2.
  
  
 
0.837
LOC112994400
Rho GTPase-activating protein SYDE1-like.
      
 0.533
KLF6
Kruppel like factor 6.
    
 
 0.462
RBFOX1
RNA binding fox-1 homolog 1.
      
 0.442
GLIS2
GLIS family zinc finger 2.
    
 
 0.430
HTRA1
HtrA serine peptidase 1.
    
 
 0.415
HOXB9
Homeobox B9.
      
 0.414
CRK
CRK proto-oncogene, adaptor protein.
      
 0.408
FBXW2
F-box and WD repeat domain containing 2.
    
 
 0.402
Your Current Organism:
Dromaius novaehollandiae
NCBI taxonomy Id: 8790
Other names: D. novaehollandiae, Dromaius novae-hollandiae, emu
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