STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE12218.1L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (539 aa)    
Predicted Functional Partners:
AEE12220.1
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
 
 0.999
AEE12219.1
COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638:IPR004393; KEGG: pgn:PGN_0534 putative nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Nicotinate-nucleotide diphosphorylase (Carboxylating); TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; IMG reference gene:2504824144; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; Belongs to the [...]
  
 0.998
AEE13616.1
COGs: COG1027 Aspartate ammonia-lyase; InterPro IPR000362:IPR018951; KEGG: pgn:PGN_0377 aspartate ammonia-lyase; PFAM: Fumarate lyase; Fumarase C, C-terminal; PRIAM: Aspartate ammonia-lyase; SPTR: Putative aspartate ammonia-lyase; IMG reference gene:2504825613; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase.
 
   
 0.980
AEE12548.1
L-asparaginase, type I; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034:IPR006033; KEGG: asparaginase; PFAM: Asparaginase/glutaminase; PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase; SPTR: L-asparaginase, type I; TIGRFAM: L-asparaginase, type I; IMG reference gene:2504824480; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I.
   
 
 0.913
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.911
pyrI
Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase.
     
  0.900
pyrB
COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase; InterPro IPR002082:IPR006132:IPR006131; KEGG: pgi:PG0357 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; IMG reference gene:2504825419; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/or [...]
     
 0.900
AEE12650.1
COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001236; KEGG: pgi:PG1949 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Lactate/malate dehydrogenase, NAD binding domain protein; IMG reference gene:2504824596; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily.
    
 0.827
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.826
AEE12928.1
COGs: COG0527 Aspartokinase; InterPro IPR001341:IPR001048; KEGG: pgi:PG2189 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Amino acid kinase family; TIGRFAM: Aspartate kinase region; IMG reference gene:2504824891; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.
    
 0.806
Your Current Organism:
Porphyromonas asaccharolytica
NCBI taxonomy Id: 879243
Other names: P. asaccharolytica DSM 20707, Porphyromonas asaccharolytica ATCC 25260, Porphyromonas asaccharolytica CCUG 7834, Porphyromonas asaccharolytica DSM 20707, Porphyromonas asaccharolytica JCM 6326, Porphyromonas asaccharolytica str. DSM 20707, Porphyromonas asaccharolytica strain DSM 20707
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