STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEL27516.1Glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR/Asp-box repeat; COGs: COG4409 Neuraminidase (sialidase); KEGG: plm:Plim_3447 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein. (385 aa)    
Predicted Functional Partners:
AEL28371.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_02130 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A.
  
 
  0.731
AEL27643.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_01216 putative arylsulfatase; PFAM: Sulfatase; SPTR: Putative arylsulfatase.
  
  0.706
AEL27365.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0659 cerebroside-sulfatase; PFAM: Sulfatase; SPTR: Cerebroside-sulfatase.
  
 
  0.702
AEL28724.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: plm:Plim_3913 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase A.
  
 
  0.696
AEL27126.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03955 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A.
    
  0.656
AEL27363.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1509 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase.
    
  0.656
AEL27888.1
PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01926 arylsulphatase A; PFAM: Sulfatase; SPTR: Arylsulphatase A.
    
  0.656
AEL27515.1
PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: mtt:Ftrac_0556 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; SPTR: Peptidase M16 domain protein; Belongs to the peptidase M16 family.
       0.601
AEL26187.1
PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR019900:IPR006652:IPR001734; KEGG: fbc:FB2170_03920 hypothetical protein; PFAM: Sodium/solute symporter; Kelch repeat type 1; SPTR: Putative uncharacterized protein; TIGRFAM: Sodium/solute symporter, subgroup.
 
     0.553
AEL24379.1
PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG4951 conserved hypothetical protein; InterPro IPR014001:IPR002755:IPR006935; KEGG: smb:smi_0394 DNA or RNA helicases of superfamily II; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA primase, small subunit; SMART: DEAD-like helicase, N-terminal; SPTR: Type III restriction enzyme, res subunit:DEAD/DEAH box helicase.
   
    0.527
Your Current Organism:
Cyclobacterium marinum
NCBI taxonomy Id: 880070
Other names: C. marinum DSM 745, Cyclobacterium marinum DSM 745, Cyclobacterium marinum LMG 13164, Cyclobacterium marinum str. DSM 745, Cyclobacterium marinum strain DSM 745
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