STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08085.1Protein of unknown function DUF362; COGs: COG2006 conserved hypothetical protein; InterPro IPR006311:IPR007160; KEGG: dol:Dole_0348 hypothetical protein; PFAM: Domain of unknown function DUF362; SPTR: Putative uncharacterized protein; IMG reference gene:2504153709; PFAM: Domain of unknown function (DUF362); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (306 aa)    
Predicted Functional Partners:
AEB08084.1
COGs: COG0348 Polyferredoxin; InterPro IPR006311:IPR001450; KEGG: sat:SYN_02058 4Fe-4S binding protein; PFAM: 4Fe-4S binding domain; SPTR: 4Fe-4S binding protein; IMG reference gene:2504153708; TIGRFAM: MauM/NapG family ferredoxin-type protein.
 
     0.905
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.443
AEB09855.1
KEGG: sfu:Sfum_1116 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding; manually curated; IMG reference gene:2504155576; PFAM: Pyridoxamine 5'-phosphate oxidase.
  
     0.402
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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