STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08713.1COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit; InterPro IPR003813; KEGG: sfu:Sfum_3014 methyl-viologen-reducing hydrogenase, delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; SPTR: Methyl-viologen-reducing hydrogenase, delta subunit; IMG reference gene:2504154366; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit. (252 aa)    
Predicted Functional Partners:
AEB08714.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR002218:IPR001450:IPR003953; KEGG: sfu:Sfum_1977 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4Fe-4S binding domain; Glucose-inhibited division protein A-related; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; IMG reference gene:2504154367; PFAM: FAD binding domain; 4Fe-4S binding domain; Glucose inhibited division protein A.
 
 0.972
AEB08712.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953:IPR001450; KEGG: sfu:Sfum_3133 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S binding domain; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; IMG reference gene:2504154365; PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD binding domain.
 
 0.956
AEB08614.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953:IPR001450; KEGG: tye:THEYE_A1831 CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4Fe-4S binding domain; SPTR: CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2; IMG reference gene:2504154264; PFAM: FAD binding domain.
 
 0.947
AEB08788.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR001327:IPR001450; KEGG: mfv:Mfer_0184 cob--com heterodisulfide reductase subunit A; PFAM: 4Fe-4S binding domain; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; SPTR: Heterodisulfide reductase, subunit A, HdrA; IMG reference gene:2504154450; PFAM: FAD dependent oxidoreductase.
   0.924
AEB08697.1
FAD dependent oxidoreductase; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR006076; KEGG: dal:Dalk_2778 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: FAD dependent oxidoreductase; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding; IMG reference gene:2504154349; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
   0.920
AEB08967.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR006076:IPR001450:IPR003953; KEGG: adg:Adeg_1885 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4Fe-4S binding domain; FAD dependent oxidoreductase; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; IMG reference gene:2504154639; PFAM: FAD binding domain.
 
 0.891
AEB08202.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterPro IPR003953:IPR001450; KEGG: sfu:Sfum_3133 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; 4Fe-4S binding domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504153831; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 0.881
AEB08550.1
COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: sfu:Sfum_1805 hypothetical protein; PFAM: Cysteine-rich domain; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: Putative uncharacterized protein; IMG reference gene:2504154197; PFAM: Cysteine-rich domain.
 
 
 0.858
AEB08702.1
COGs: COG2048 Heterodisulfide reductase subunit B; InterPro IPR004017; KEGG: sfu:Sfum_1805 hypothetical protein; PFAM: Cysteine-rich domain; PRIAM: CoB--CoM heterodisulfide reductase; SPTR: Putative uncharacterized protein; IMG reference gene:2504154354; PFAM: Cysteine-rich domain.
 
 
 0.853
AEB08966.1
Hypothetical protein; COGs: COG1150 Heterodisulfide reductase subunit C; KEGG: dak:DaAHT2_1634 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding; manually curated; IMG reference gene:2504154638.
 
 
 0.824
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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