STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB08755.1KEGG: pic:PICST_56965 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2504154411. (100 aa)    
Predicted Functional Partners:
AEB08754.1
KEGG: sus:Acid_1959 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154410.
       0.773
AEB08753.1
Putative phage repressor; COGs: COG2932 transcriptional regulator protein; InterPro IPR001387:IPR019759; KEGG: dbr:Deba_0107 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SPTR: Putative phage repressor; IMG reference gene:2504154409; PFAM: Helix-turn-helix; Peptidase S24-like.
       0.570
AEB08756.1
ATPase associated with various cellular activities AAA_5; COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR003593:IPR011704; KEGG: mpd:MCP_0968 hypothetical protein; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; IMG reference gene:2504154412; PFAM: AAA domain (dynein-related subfamily).
       0.570
AEB08757.1
COGs: COG4268 McrBC 5-methylcytosine restriction system component; InterPro IPR019292; KEGG: dau:Daud_0401 McrBC 5-methylcytosine restriction system component-like protein; PFAM: 5-methylcytosine restriction system component; SPTR: McrBC 5-methylcytosine restriction system component-like protein; IMG reference gene:2504154413; PFAM: McrBC 5-methylcytosine restriction system component.
       0.570
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.