STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB09951.1RNA-binding protein; InterPro IPR019300; KEGG: dbr:Deba_1081 RNA-binding protein, predicted; PFAM: RNA-binding protein, predicted; SPTR: RNA-binding protein, predicted; IMG reference gene:2504155676; PFAM: Predicted RNA-binding protein. (120 aa)    
Predicted Functional Partners:
AEB08577.1
KEGG: dol:Dole_0381 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504154226.
 
     0.783
AEB09950.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
       0.773
AEB09798.1
COGs: COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein); InterPro IPR016041; KEGG: dat:HRM2_16690 acetyl-CoA decarbonylase/synthase complex subunit delta; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; SPTR: CdhD; IMG reference gene:2504155516; PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase, delta subunit.
 
    0.682
AEB10461.1
KEGG: dol:Dole_1575 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156207; PFAM: Dynamin family.
  
     0.601
AEB09952.1
Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mac:MA2152 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: Methyltransferase type 11; SPTR: Ubiquinone/menaquinone biosynthesis methyltransferase; IMG reference gene:2504155677; PFAM: Methyltransferase domain.
       0.586
AEB09953.1
Hypothetical protein; KEGG: tfu:Tfu_0480 cell wall-associated hydrolase (invasion-associated proteins); SPTR: Similar to Cell wall-associated hydrolases (Invasion-associated proteins); IMG reference gene:2504155678.
       0.553
AEB10332.1
KEGG: sfu:Sfum_4098 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504156073.
 
     0.540
AEB09177.1
InterPro IPR000644; KEGG: tye:THEYE_A0728 CBS domain pair, putative; PFAM: Cystathionine beta-synthase, core; SPTR: CBS-domain-containing protein; IMG reference gene:2504154859; PFAM: CBS domain.
  
     0.517
AEB09905.1
InterPro IPR000644; KEGG: tye:THEYE_A0728 CBS domain pair, putative; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain pair, putative; IMG reference gene:2504155629; PFAM: CBS domain.
  
     0.483
AEB10284.1
COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: dol:Dole_0143 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Putative uncharacterized protein; IMG reference gene:2504156022; PFAM: Amidohydrolase.
  
     0.472
Your Current Organism:
Desulfobacca acetoxidans
NCBI taxonomy Id: 880072
Other names: D. acetoxidans DSM 11109, Desulfobacca acetoxidans DSM 11109, Desulfobacca acetoxidans str. DSM 11109, Desulfobacca acetoxidans strain DSM 11109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.