STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF18685.1Divalent cation tolerance protein. (82 aa)    
Predicted Functional Partners:
APF18686.1
Initiation factor 2 subunit family protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.773
APF18687.1
Looped-hinge helix DNA binding domain-containing protein, AbrB family.
       0.773
APF18688.1
Putative nucleic acid-binding protein, contains PIN domain.
       0.773
APF18689.1
Hypothetical protein.
       0.773
yqeB
Selenium-dependent molybdenum hydroxylase system protein YqeB.
       0.773
APF18691.1
Alanine or glycine:cation symporter, AGCS family.
       0.678
APF18921.1
Superoxide reductase.
   
    0.482
dsbD
Thiol:disulfide interchange protein DsbD.
  
  
 0.466
APF18684.1
Aminotransferase class-III; acetylornithine/N-succinyldiaminopimelate aminotransferase/acetylornithine/LysW-gamma-L-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
   0.425
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.