STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APF19793.1FHA domain-containing protein. (484 aa)    
Predicted Functional Partners:
APF19789.1
Serine/threonine protein kinase.
 
 
 0.981
prpC
Serine/threonine protein phosphatase PrpC.
 
 
 0.910
APF19790.1
Serine/threonine protein kinase.
 
 
 0.908
APF19795.1
FHA domain-containing protein.
 
     0.835
APF18660.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.829
APF19794.1
Putative membrane protein YckC, RDD family.
  
  
 0.790
APF18488.1
Glutamate synthase (NADH) large subunit.
   
   0.787
APF19985.1
Serine/threonine protein kinase.
 
 
 0.729
prkC
PEGA domain-containing protein.
 
 
 0.724
APF19868.1
Serine/threonine protein kinase.
 
 
 0.717
Your Current Organism:
Caldithrix abyssi
NCBI taxonomy Id: 880073
Other names: C. abyssi DSM 13497, Caldithrix abyssi DSM 13497, Caldithrix abyssi LF13, Caldithrix abyssi str. DSM 13497, Caldithrix abyssi strain DSM 13497
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.