STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8R2J2_SELMLPoly [ADP-ribose] polymerase. (646 aa)    
Predicted Functional Partners:
D8QRZ2_SELML
Uncharacterized protein.
  
 
 0.688
D8R4Q0_SELML
Uncharacterized protein.
  
 
 0.687
D8RIV7_SELML
Uncharacterized protein.
  
 
 0.686
D8RJZ6_SELML
Uncharacterized protein.
  
 
 0.682
D8R2U1_SELML
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.653
SCE1a
SUMO-conjugating enzyme 1a; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.615
D8RBW2_SELML
Macro domain-containing protein.
   
 
 0.581
D8RXR4_SELML
Macro domain-containing protein.
   
 
 0.581
CDKD-1
Uncharacterized protein CDKD-1; Belongs to the protein kinase superfamily.
     
 0.575
D8S8X5_SELML
Ribosomal_S27 domain-containing protein.
    
  0.560
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.