STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8R5T1_SELMLPectate lyase. (420 aa)    
Predicted Functional Partners:
D8T5K6_SELML
Pectinesterase.
  
 
 0.735
D8RSK0_SELML
Uncharacterized protein.
     
 0.733
D8RHH8_SELML
Uncharacterized protein.
     
 0.724
D8SD12_SELML
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin.
  
 
 0.720
D8RD55_SELML
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
     
 0.718
D8R5P3_SELML
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin.
  
 
 0.717
D8RHB8_SELML
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin.
  
 
 0.716
D8RWS7_SELML
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin.
  
 
  0.714
D8SCR0_SELML
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin.
  
 
  0.714
D8SGY0_SELML
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin.
  
 
  0.714
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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