STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8RJK0_SELMLYTH domain-containing protein. (150 aa)    
Predicted Functional Partners:
D8QXZ6_SELML
WD_REPEATS_REGION domain-containing protein.
    
 
 0.948
D8RKS9_SELML
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.931
D8T7I4_SELML
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.931
D8QYX6_SELML
Suf domain-containing protein.
    
 
 0.917
D8RA86_SELML
Suf domain-containing protein.
    
 
 0.917
D8R080_SELML
CPSF_A domain-containing protein.
    
 
 0.907
D8SZQ2_SELML
CPSF_A domain-containing protein.
    
 
 0.907
D8RHM4_SELML
Fip1 domain-containing protein.
   
 
 0.836
D8S4U4_SELML
Fip1 domain-containing protein.
   
 
 0.836
D8QWQ1_SELML
CID domain-containing protein.
   
 
 0.833
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.