SmABCB21 protein (Selaginella moellendorffii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

SmABCB21

ATP-binding cassette transporter. (596 aa)

Predicted Functional Partners:

D8RNG4_SELML

0.900

D8T687_SELML

0.578

MS2A-2

0.487

Your Current Organism:

Selaginella moellendorffii

NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8RNG4_SELML	D8T687_SELML	D8RNG4	D8T687	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.578
D8RNG4_SELML	MS2A-2	D8RNG4	D8R812	Uncharacterized protein.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.487
D8RNG4_SELML	SmABCB21	D8RNG4	D8RLZ0	Uncharacterized protein.	ATP-binding cassette transporter.	0.900
D8T687_SELML	D8RNG4_SELML	D8T687	D8RNG4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.578
D8T687_SELML	MS2A-2	D8T687	D8R812	TPR_REGION domain-containing protein.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.576
D8T687_SELML	SmABCB21	D8T687	D8RLZ0	TPR_REGION domain-containing protein.	ATP-binding cassette transporter.	0.578
MS2A-2	D8RNG4_SELML	D8R812	D8RNG4	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	Uncharacterized protein.	0.487
MS2A-2	D8T687_SELML	D8R812	D8T687	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	TPR_REGION domain-containing protein.	0.576
MS2A-2	SmABCB21	D8R812	D8RLZ0	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	ATP-binding cassette transporter.	0.487
SmABCB21	D8RNG4_SELML	D8RLZ0	D8RNG4	ATP-binding cassette transporter.	Uncharacterized protein.	0.900
SmABCB21	D8T687_SELML	D8RLZ0	D8T687	ATP-binding cassette transporter.	TPR_REGION domain-containing protein.	0.578
SmABCB21	MS2A-2	D8RLZ0	D8R812	ATP-binding cassette transporter.	Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.	0.487