STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8S805_SELMLTFIIF_beta domain-containing protein. (270 aa)    
Predicted Functional Partners:
D8S339_SELML
TFIIE beta domain-containing protein.
   
 0.988
D8S8M8_SELML
Uncharacterized protein.
   
 0.987
D8R9N1_SELML
RPOL4c domain-containing protein.
   
 0.986
D8SN94_SELML
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.986
D8SCP8_SELML
HTH TFE/IIEalpha-type domain-containing protein.
  
 0.983
D8SGW9_SELML
HTH TFE/IIEalpha-type domain-containing protein.
  
 0.983
D8QVD4_SELML
Uncharacterized protein.
    
 0.978
D8RF83_SELML
Uncharacterized protein.
    
 0.978
D8RRF0_SELML
RNA_pol_L_2 domain-containing protein.
    
 0.977
D8S363_SELML
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
   
 0.975
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.