STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8T0X7_SELMLTRANSKETOLASE_1 domain-containing protein. (728 aa)    
Predicted Functional Partners:
D8T2C2_SELML
Uncharacterized protein.
  
 
 0.969
D8T827_SELML
Uncharacterized protein.
  
 
 0.969
D8RDZ9_SELML
AP2/ERF domain-containing protein.
  
 0.877
D8SU30_SELML
AP2/ERF domain-containing protein.
  
 0.877
D8QPV1_SELML
Uncharacterized protein.
  
 0.786
D8RMF2_SELML
Uncharacterized protein.
  
 0.786
D8SKM4_SELML
Uncharacterized protein.
  
 0.786
D8SLI5_SELML
Uncharacterized protein.
  
 0.786
D8RDL1_SELML
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
 
   
 0.688
D8R545_SELML
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 
 0.671
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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