STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D8T8V4_SELMLAB hydrolase-1 domain-containing protein. (218 aa)    
Predicted Functional Partners:
D8SAH2_SELML
FHA domain-containing protein.
   
 0.973
D8R327_SELML
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.909
D8SMF4_SELML
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.909
matK
Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily.
    
 0.901
ycf2
Uncharacterized protein ycf2.
    
 0.901
rpl23
Ribosomal protein L23.
    
 0.901
D8QYJ8_SELML
PHD-type domain-containing protein.
    
 0.901
MMD1-1
Uncharacterized protein MMD1-1.
    
 0.901
MMD1-2
Uncharacterized protein MMD1-2.
    
 0.901
D8TE77_SELML
Maturase K; Usually encoded in the trnK tRNA gene intron. Probably assists in splicing its own and other chloroplast group II introns. Belongs to the intron maturase 2 family. MatK subfamily.
    
 0.901
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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