STRINGSTRING
EFJ20000 protein (Selaginella moellendorffii) - STRING interaction network
"EFJ20000" - Uncharacterized protein in Selaginella moellendorffii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFJ20000Uncharacterized protein; Belongs to the helicase family. Dicer subfamily (1686 aa)    
Predicted Functional Partners:
MET1-2
Uncharacterized protein MET1-2 (773 aa)
     
   
  0.816
MET1-3
Uncharacterized protein MET1-3 (933 aa)
     
   
  0.816
EFJ21698
Uncharacterized protein (299 aa)
       
 
  0.784
EFJ20229
Uncharacterized protein (798 aa)
       
 
  0.751
EFJ14340
Uncharacterized protein (810 aa)
       
 
  0.751
EFJ26756
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1438 aa)
     
 
  0.733
EFJ26453
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1444 aa)
     
 
  0.733
EFJ25788
Uncharacterized protein; Belongs to the argonaute family (848 aa)
     
 
  0.731
EFJ22162
Uncharacterized protein; Belongs to the argonaute family (851 aa)
     
 
  0.731
EFJ25956
Uncharacterized protein (543 aa)
     
        0.723
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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