STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFJ26532DNA ligase (638 aa)    
Predicted Functional Partners:
EFJ18561
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism
   
  
 0.988
EFJ36491
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism
   
  
 0.988
EFJ18266
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand
   
 
 0.985
EFJ22006
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand
   
 
 0.985
EFJ10540
Putative uncharacterized protein
   
 
 0.919
EFJ19284
Uncharacterized protein
   
 
 0.919
EFJ35826
DNA primase ; Belongs to the eukaryotic-type primase small subunit family
   
  
 0.908
EFJ36376
DNA primase ; Belongs to the eukaryotic-type primase small subunit family
   
  
 0.908
EFJ15355
Uncharacterized protein; DNA polymerase
   
 
 0.898
EFJ24993
Uncharacterized protein; DNA polymerase
   
 
 0.898
Your Current Organism:
Selaginella moellendorffii
NCBI taxonomy Id: 88036
Other names: S. moellendorffii, Selaginella moellendorffii, Selaginella moellendorffii Hieron., Selaginella moellendorfii
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