STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_0295Dipeptide transport system permease protein. (335 aa)    
Predicted Functional Partners:
EIO_0294
Probable dipeptide transport system permease protein.
 
 0.993
dppD1
Peptide ABC transporter ATP-binding protein.
 
  0.988
dppA
Dipeptide transport protein (ABC superfamily, peri_bind).
  0.984
EIO_0292
ABC transporter ATP-binding component.
 
  0.980
EIO_0291
(S)-2-hydroxy-acid oxidase.
       0.762
EIO_0296
Endoribonuclease L-PSP.
       0.741
EIO_1976
Binding-protein-dependent transport systems inner membrane component.
 
 0.741
EIO_0739
Binding-protein-dependent transport systems inner membrane component.
 
 0.739
EIO_0783
Peptide ABC transporter permease.
 
 0.736
EIO_1495
Dipeptide ABC transporter.
 
 
  0.735
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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