STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIO_1325Siderophore-interacting protein. (248 aa)    
Predicted Functional Partners:
EIO_1263
Putative acinetobactin utilization protein (bauF).
  
     0.727
EIO_1334
Extracellular solute-binding protein family 1.
 
     0.532
EIO_1324
Conserved hypothetical protein.
       0.505
ade
Adenine deaminase.
       0.462
EIO_1327
Alanine racemase domain protein.
       0.462
EIO_1328
Transcriptional regulator.
       0.462
EIO_1329
N-carbamyl-D-amino acid amidohydrolase.
       0.462
EIO_1330
N-carbamyl-D-amino acid amidohydrolase.
       0.462
potA
Spermidine/putrescine ABC transporter.
      0.462
EIO_1332
Binding-protein-dependent transport systems inner membrane component.
       0.462
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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