STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrcAHeat-inducible transcription repressor. (355 aa)    
Predicted Functional Partners:
grpE
GrpE protein HSP-70 cofactor, putative.
  
  
 0.988
EIO_2841
Chaperone protein DnaK.
  
  
 0.938
EIO_2840
Chaperone protein DnaJ.
  
  
 0.815
EIO_1743
Chaperone protein DnaJ, putative.
  
  
 0.771
EIO_1229
Phage terminase GpA.
   
  
 0.765
EIO_1756
Protease subunit of ATP-dependent Clp protease.
   
  
 0.765
groEL
Chaperonin GroEL.
  
  
 0.758
EIO_2748
Coproporphyrinogen III oxidase.
  
    0.735
rph
Ribonuclease PH.
     
 0.711
EIO_2747
Ham1 family protein.
       0.710
Your Current Organism:
Ketogulonicigenium vulgare
NCBI taxonomy Id: 880591
Other names: K. vulgare Y25, Ketogulonicigenium vulgare Y25, Ketogulonicigenium vulgare str. Y25, Ketogulonicigenium vulgare strain Y25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.