STRINGSTRING
DVU_0311 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0311" - Flagellar assembly protein FliH, putative in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0311Flagellar assembly protein FliH, putative; Identified by similarity to SP-P31068 (250 aa)    
Predicted Functional Partners:
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction (538 aa)
   
 
  0.992
fliI
Flagellum-specific ATP synthase FliI; Identified by similarity to SP-P23445; match to protein family HMM PF00006; match to protein family HMM TIGR01026 (437 aa)
   
 
  0.988
fliG
Flagellar motor switch protein FliG; Identified by similarity to SP-P23448; match to protein family HMM PF01706; match to protein family HMM TIGR00207 (338 aa)
   
 
  0.988
DVU_1445
Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120 (531 aa)
 
   
  0.973
DVU_0913
Uncharacterized protein; Identified by similarity to OMNI-TM0512 (145 aa)
 
   
  0.964
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (136 aa)
 
   
  0.962
flgC
Flagellar basal-body rod protein FlgC; Identified by similarity to SP-P75935; match to protein family HMM PF00460; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family (145 aa)
   
   
  0.957
fliM
Flagellar motor switch protein FliM; Identified by similarity to SP-P06974; match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397 (326 aa)
   
 
  0.956
DVU_0514
Identified by match to protein family HMM PF03240 (310 aa)
 
   
  0.953
fliN
Flagellar motor switch protein FliN; Identified by similarity to SP-P15070; match to protein family HMM PF01052 (170 aa)
   
 
  0.948
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (18%) [HD]