STRINGSTRING
DVU_0373 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_0373" - CoA-binding domain protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0373CoA-binding domain protein; Identified by similarity to OMNI-NTL01PA0352; match to protein family HMM PF02629 (770 aa)    
Predicted Functional Partners:
DVU_0374
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF01558 (832 aa)
 
 
 
  0.819
DVU_0372
annotation not available (230 aa)
 
          0.717
DVU_0378
Thioredoxin, putative; Identified by similarity to SP-P80579 (104 aa)
 
          0.709
DVU_2415
Diadenylate cyclase; Identified by Glimmer2; putative (575 aa)
   
          0.689
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
     
 
  0.656
DVU_1621
Uncharacterized protein; Identified by Glimmer2; putative (140 aa)
   
          0.652
DVU_3276
Identified by similarity to SP-P08813; match to protein family HMM PF00037 (62 aa)
 
 
      0.604
DVU_2801
Uncharacterized protein; Identified by Glimmer2; putative (444 aa)
   
          0.589
DVU_3379
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen (777 aa)
   
      0.569
DVU_0631
Uncharacterized protein; Identified by similarity to GP-14041200 (521 aa)
     
      0.559
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (25%) [HD]