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csrA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"csrA" - Translational regulator CsrA in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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csrATranslational regulator CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5’-UTR at or near the Shine-Dalgarno sequence preventing ribosome- binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW (78 aa)    
Predicted Functional Partners:
fliW
Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum; Belongs to the FliW family (173 aa)
 
 
  0.999
DVU_0519
Flagellar hook-associated protein FlgK, putative; Identified by similarity to SP-P33235; match to protein family HMM PF00460; Belongs to the flagella basal body rod proteins family (698 aa)
 
     
  0.922
DVU_0520
Flagellar hook-associated protein FlgL, putative; Identified by match to protein family HMM PF00669; match to protein family HMM PF02012 (523 aa)
 
     
  0.919
DVU_2082
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (297 aa)
 
 
 
  0.874
DVU_0410
Uncharacterized protein; Identified by Glimmer2; putative (201 aa)
     
      0.872
DVU_0518
Uncharacterized protein; Identified by Glimmer2; putative (154 aa)
              0.852
DVU_0517
Peptidase, M23/M37 family; Identified by similarity to SP-P75942; match to protein family HMM PF01551 (610 aa)
              0.812
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation (378 aa)
              0.800
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation (238 aa)
         
  0.798
DVU_0514
Identified by match to protein family HMM PF03240 (310 aa)
         
  0.766
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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