STRINGSTRING
DVU_1061 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1061" - Identified by similarity to SP:P71243 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1061Identified by similarity to SP-P71243; match to protein family HMM PF00534 (353 aa)    
Predicted Functional Partners:
DVU_1060
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534 (367 aa)
 
       
0.901
DVU_1059
annotation not available (390 aa)
   
        0.850
DVU_1062
Uncharacterized protein; Identified by similarity to OMNI-NTL01SS02998 (256 aa)
 
          0.708
DVU_1803
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534 (362 aa)
   
          0.604
DVU_1879
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534 (366 aa)
   
          0.600
DVU_0328
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534 (381 aa)
   
          0.585
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily (640 aa)
     
 
  0.529
DVU_0938
annotation not available (122 aa)
     
 
  0.529
DVU_2635
Glycosyl transferase, group 1 family protein; Identified by similarity to SP-P25740; match to protein family HMM PF00534 (377 aa)
   
          0.470
DVU_2349
Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094 (855 aa)
   
   
  0.458
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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