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DVU_1116 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1116" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1116Uncharacterized protein; Identified by Glimmer2; putative (331 aa)    
Predicted Functional Partners:
DVU_1117
Uncharacterized protein; Identified by Glimmer2; putative (115 aa)
              0.845
DVU_1118
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1420 (316 aa)
              0.830
DVU_1120
Uncharacterized protein; Identified by similarity to OMNI-NTL03ST1417 (530 aa)
              0.499
DVU_1119
Virion morphogenesis protein; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641 (433 aa)
              0.499
DVU_1114
Virion morphogenesis protein; Identified by match to protein family HMM PF05069; match to protein family HMM TIGR01635 (146 aa)
              0.468
DVU_1115
annotation not available (143 aa)
              0.443
DVU_1111
Uncharacterized protein; Identified by Glimmer2; putative (561 aa)
              0.427
DVU_1110
Uncharacterized protein; Identified by Glimmer2; putative (148 aa)
              0.421
DVU_1113
Uncharacterized protein; Identified by Glimmer2; putative (178 aa)
              0.414
DVU_1112
Uncharacterized protein; Identified by Glimmer2; putative (126 aa)
              0.414
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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